Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914450.1_cds_XP_016464426.1_57466
CDS Infomation

[gene=LOC107787386] [db_xref=GeneID:107787386] [protein=histone acetyltransferase GCN5-like isoform X1] [protein_id=XP_016464426.1] [location=join(107637..108191,109811..109875,109962..110042,111411..111482,119074..119242,120112..120155,120411..120510,122187..122255,137108..137162,142566..142915,151906..151999,153738..153879,153985..154048)] [gbkey=CDS]
Sequence

ATGGATGCTCACTCATCCCACCTGACGGCGCCGGGCCGGTCGCGGAGTTCACAATCTCCA
TCACCCTCGCATTCGGCGTCTGCCTCAGCAACCTCGTCGATCCACAAACGCAAGATGGCA
TCTGACGACCACGCGCCGCCTTTCCCGTCCTCCTTCTCCGACACGCGCGACGGCGCTCTC
ACCTCCAACGATGACCTAGAGAGTATCAGCGCCCGCGGAGGCGGTGCTGATTCCGATTCC
GAAGACGACTCCGAAGAGGTGGGTGATGATGACGAGGAAGATTACGATGGCTCTTCCATG
CGCAATTTCACTGCGTCGCGGTTGGAGAATAGTGCACCCTCTGGGTCAGGGAGGAATACT
AAGCTTAAGAGTGATAATTCGGTGAAAATTGAGTCGTCGGAGGTAGTGAAAGAGGGTTGT
GTAATGCCACCTACAGCTGCTGCTGGTTCTGTTTCAGGGGCGGTGGTTAAGGATGAGAGT
ATGAAGAACATTTTTACTGACAATTTACAGACCAGTGGTGCCTACACTGCAAGGGAAGAG
AGCTTAAAGAGAGAGGAGGAGTCTGGAAGACTCAAGTTTGCATGTGTTTCAAACGATGGT
ATTGATGAGCACATGATTTGGTTAATAGGATTGAAGAATATATTTGCGAGGCAACTCCCA
AACATGCCTAAGGAATATATTGTTCGTCTTGTGATGGACAGGAGCCATAAGTCTGTAATG
GTCATCCGACGTAATCTGGTGGTTGGTGGTATAACATATCGTCCATATGCCAGCCAGAAG
TTTGGGGAGATAGCTTTTTGTGCAATAACAGCAGATGAACAAGTTAAGGGTTATGGCACC
AGACTGATGAATCACTTAAAGCAGCATGCTCGTGATGTGGATGGGCTGACTCATTTTCTA
ACATATGCTGACAACAATGCTGTTGGTTACTTTGTCAAACAGGGATTCACGAAAGAGATT
TATTTAGAGAAAGAGCGTTGGCAAGGGTATATTAAAGATTATGACGGTGGAATTCTTATG
GAATGCAAAATAGATCCAAAGCTTCCATATACTGATTTATCTACCATGATACGTCGTCAA
AGGCAGGCAATTGATGAAAAGATAAGGGAGCTATCAAATTGTCATATTGTCTACCCAGGA
ATTGATTTTCAGAAGAAAGAAGCTGGCATTCCTAAAAAAGCCATCAAGGTTGAAGATATC
CCCGGCTTGAGAAGAAGCCGACGAGGGGTAATGCTTTATTCAACATCAATGGAGAAGTCC
GGGTTAGCTGTGTCTCATGAACAACCAAAGGCGTTAACTTATGATAAAATCACATGCATT
GTGATTACTGGGGAAAGCCAAGGCATACAAAGGAGACATGTCGGAAACTGTAGACCGACT
AGAGGCCGTGGAGGAAAACATGTAGGTCTATCAAGGGTTCAAGCTAATATTACAGAAAAT
ATTGAGACATTCGGGGAAACTGCTACTGGAGAAGCTTTTTCTTCGAATGAAGTTCAGCAT
CTTCGCCGTCTCCTGAACAAACTTGATTCTTTTAATGTTGCCACTTCCAATTACATGCAG
ATAATGCATGACCATCCTGATTCGTGGCCGTTCAAAGAACCTGTTGATGCACGGGATGTT
CCCGATTATTATGACATCATCAAAGATCCAATAGATCTAAAAACAATGTCGAAGCGCGTT
GAGTCGGAGTTATATTATGTGACATTTGATATGTTTGTTGCGGATGTCAGAAGGATGTTT
GCTAATGCTCGCACCTACAATTCTCCGGAGACAATTTACTACAAATGTGCAACCAGGCTT
GAGTCACATTTCTCAAACAAAGTTCAAGCTGGTCTACAGTCTGGTATCAAGATTCAATAG

Peptide Sequence

PEP ID

XP_016464426.1
PEP Infomation

PREDICTED: histone acetyltransferase GCN5-like isoform X1 [Nicotiana tabacum]
Sequence

MDAHSSHLTAPGRSRSSQSPSPSHSASASATSSIHKRKMASDDHAPPFPSSFSDTRDGAL
TSNDDLESISARGGGADSDSEDDSEEVGDDDEEDYDGSSMRNFTASRLENSAPSGSGRNT
KLKSDNSVKIESSEVVKEGCVMPPTAAAGSVSGAVVKDESMKNIFTDNLQTSGAYTAREE
SLKREEESGRLKFACVSNDGIDEHMIWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVM
VIRRNLVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFL
TYADNNAVGYFVKQGFTKEIYLEKERWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQ
RQAIDEKIRELSNCHIVYPGIDFQKKEAGIPKKAIKVEDIPGLRRSRRGVMLYSTSMEKS
GLAVSHEQPKALTYDKITCIVITGESQGIQRRHVGNCRPTRGRGGKHVGLSRVQANITEN
IETFGETATGEAFSSNEVQHLRRLLNKLDSFNVATSNYMQIMHDHPDSWPFKEPVDARDV
PDYYDIIKDPIDLKTMSKRVESELYYVTFDMFVADVRRMFANARTYNSPETIYYKCATRL
ESHFSNKVQAGLQSGIKIQ

Transcript Sequence

Gene sequence data has not been registered.